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Results

This page shows the high level results over all of the HMP2 pipelines. Each run is comprised of a set of data that has been uploaded to the HMP2 servers. Once there, it is filtered for quality and error checked for completeness and saved under the raw files page. After the QC phase, the data is run on a specific Anadama pipeline, producing several types of data products. Each data product for a project is saved on the products.

Raw Files

FileName Log
HSM5MD8J.fastq.tgzHSM5MD8J.log
ESM5GEZ1.fastq.tgzESM5GEZ1.log
MSM5LLGN.fastq.tgzMSM5LLGN.log
MSM5LLHA.fastq.tgzMSM5LLHA.log
ESM5ME9D.fastq.tgzESM5ME9D.log
ESM5MEE6.fastq.tgzESM5MEE6.log
MSM5LLEZ.fastq.tgzMSM5LLEZ.log
MSM5LLGR.fastq.tgzMSM5LLGR.log
HSM5MD4U.fastq.tgzHSM5MD4U.log
HSM5MD3L.fastq.tgzHSM5MD3L.log
CSM5MCVZ.fastq.tgzCSM5MCVZ.log
HSM5MD8N.fastq.tgzHSM5MD8N.log
CSM5MCUA.fastq.tgzCSM5MCUA.log
HSM5MD4W.fastq.tgzHSM5MD4W.log
ESM5ME9H.fastq.tgzESM5ME9H.log
CSM5MCVF.fastq.tgzCSM5MCVF.log
ESM5GEZ6.fastq.tgzESM5GEZ6.log
HSM5MD5H.fastq.tgzHSM5MD5H.log
CSM5MCVD.fastq.tgzCSM5MCVD.log
MSM5LLHK.fastq.tgzMSM5LLHK.log
MSM5LLHI.fastq.tgzMSM5LLHI.log
ESM5MEE2.fastq.tgzESM5MEE2.log
ESM5MEDZ.fastq.tgzESM5MEDZ.log
MSM5LLIK.fastq.tgzMSM5LLIK.log
MSM5LLFU.fastq.tgzMSM5LLFU.log
MSM633FF.fastq.tgzMSM633FF.log
ESM5MEAB.fastq.tgzESM5MEAB.log
HSM5FZBT.fastq.tgzHSM5FZBT.log
MSM5LLHV.fastq.tgzMSM5LLHV.log
HSM5FZBU.fastq.tgzHSM5FZBU.log
MSM5LLGJ.fastq.tgzMSM5LLGJ.log
ESM5GEZ3.fastq.tgzESM5GEZ3.log
HSM5FZBR.fastq.tgzHSM5FZBR.log
CSM5MCUY.fastq.tgzCSM5MCUY.log
MSM5FZ9Q.fastq.tgzMSM5FZ9Q.log
MSM5LLD8.fastq.tgzMSM5LLD8.log
CSM5MCUK.fastq.tgzCSM5MCUK.log
MSM5LLFG.fastq.tgzMSM5LLFG.log
MSM5LLD6.fastq.tgzMSM5LLD6.log
MSM5LLE3.fastq.tgzMSM5LLE3.log
HSM5MD82.fastq.tgzHSM5MD82.log
CSM5MCVX.fastq.tgzCSM5MCVX.log
MSM5LLGP.fastq.tgzMSM5LLGP.log
ESM5MEBL.fastq.tgzESM5MEBL.log
MSM5LLHQ.fastq.tgzMSM5LLHQ.log
ESM5GEYW.fastq.tgzESM5GEYW.log
HSM5MD86.fastq.tgzHSM5MD86.log
MSM5LLHG.fastq.tgzMSM5LLHG.log
MSM5LLHO.fastq.tgzMSM5LLHO.log
HSM5MD3J.fastq.tgzHSM5MD3J.log
HSM5FZBP.fastq.tgzHSM5FZBP.log
MSM5FZ9S.fastq.tgzMSM5FZ9S.log
CSM5FZ42.fastq.tgzCSM5FZ42.log
MSM5LLHX.fastq.tgzMSM5LLHX.log
MSM5LLGF.fastq.tgzMSM5LLGF.log
ESM5ME9G.fastq.tgzESM5ME9G.log
CSM5MCUE.fastq.tgzCSM5MCUE.log
CSM5MCU8.fastq.tgzCSM5MCU8.log
CSM5MCVB.fastq.tgzCSM5MCVB.log
CSM5MCUI.fastq.tgzCSM5MCUI.log
ESM5GEYY.fastq.tgzESM5GEYY.log
ESM5GEYX.fastq.tgzESM5GEYX.log
MSM5LLGD.fastq.tgzMSM5LLGD.log
CSM5MCV5.fastq.tgzCSM5MCV5.log
MSM5FZ9Z.fastq.tgzMSM5FZ9Z.log
CSM5FZ44.fastq.tgzCSM5FZ44.log
HSM5MD7Z.fastq.tgzHSM5MD7Z.log
CSM5FZ3Z.fastq.tgzCSM5FZ3Z.log
MSM5LLI4.fastq.tgzMSM5LLI4.log
MSM5LLFK.fastq.tgzMSM5LLFK.log
MSM5LLFM.fastq.tgzMSM5LLFM.log
CSM5MCWI.fastq.tgzCSM5MCWI.log
CSM5YRY7.fastq.tgzCSM5YRY7.log
MSM5LLHZ.fastq.tgzMSM5LLHZ.log
CSM5MCUU.fastq.tgzCSM5MCUU.log
MSM5LLEL.fastq.tgzMSM5LLEL.log
MSM5LLGT.fastq.tgzMSM5LLGT.log
MSM5LLFQ.fastq.tgzMSM5LLFQ.log
ESM5MEET.fastq.tgzESM5MEET.log
CSM5FZ4G.fastq.tgzCSM5FZ4G.log
HSM5MD8A.fastq.tgzHSM5MD8A.log
CSM5FZ3T.fastq.tgzCSM5FZ3T.log
CSM5FZ4E.fastq.tgzCSM5FZ4E.log
HSM5MD3W.fastq.tgzHSM5MD3W.log
MSM5LLH8.fastq.tgzMSM5LLH8.log
CSM5MCW8.fastq.tgzCSM5MCW8.log
CSM5MCU6.fastq.tgzCSM5MCU6.log
HSM5MD4R.fastq.tgzHSM5MD4R.log
ESM5GEZA.fastq.tgzESM5GEZA.log
MSM5LLHM.fastq.tgzMSM5LLHM.log
MSM5LLIE.fastq.tgzMSM5LLIE.log
HSM5MD4B.fastq.tgzHSM5MD4B.log
CSM5MCTZ.fastq.tgzCSM5MCTZ.log
CSM5FZ3R.fastq.tgzCSM5FZ3R.log
CSM5MCUG.fastq.tgzCSM5MCUG.log
CSM5FZ48.fastq.tgzCSM5FZ48.log
CSM5FZ3N.fastq.tgzCSM5FZ3N.log
HSM5MD4A.fastq.tgzHSM5MD4A.log
MSM5LLE9.fastq.tgzMSM5LLE9.log
MSM5FZ9X.fastq.tgzMSM5FZ9X.log
MSM5LLFO.fastq.tgzMSM5LLFO.log
CSM5FZ4C.fastq.tgzCSM5FZ4C.log
ESM5MEEB.fastq.tgzESM5MEEB.log
MSM5LLIM.fastq.tgzMSM5LLIM.log
HSM5MD59.fastq.tgzHSM5MD59.log
MSM5FZA2.fastq.tgzMSM5FZA2.log
CSM5MCWM.fastq.tgzCSM5MCWM.log
ESM5GEZ8.fastq.tgzESM5GEZ8.log
ESM5MEA7.fastq.tgzESM5MEA7.log
MSM5LLEH.fastq.tgzMSM5LLEH.log
MSM5LLH6.fastq.tgzMSM5LLH6.log
MSM5LLIO.fastq.tgzMSM5LLIO.log
CSM5FZ3X.fastq.tgzCSM5FZ3X.log
CSM5MCVV.fastq.tgzCSM5MCVV.log
HSM5MD47.fastq.tgzHSM5MD47.log
CSM5MCVJ.fastq.tgzCSM5MCVJ.log
MSM5LLEB.fastq.tgzMSM5LLEB.log
MSM5LLHE.fastq.tgzMSM5LLHE.log
HSM5MD5K.fastq.tgzHSM5MD5K.log
MSM5LLH4.fastq.tgzMSM5LLH4.log
CSM5MCUS.fastq.tgzCSM5MCUS.log
HSM5MD7W.fastq.tgzHSM5MD7W.log
MSM5LLIC.fastq.tgzMSM5LLIC.log
CSM5MCU4.fastq.tgzCSM5MCU4.log
HSM5MD8P.fastq.tgzHSM5MD8P.log
CSM5FZ3V.fastq.tgzCSM5FZ3V.log
CSM5MCVH.fastq.tgzCSM5MCVH.log
ESM5MEBQ.fastq.tgzESM5MEBQ.log
MSM5LLIQ.fastq.tgzMSM5LLIQ.log
MSM5LLI8.fastq.tgzMSM5LLI8.log
MSM5FZ9V.fastq.tgzMSM5FZ9V.log
CSM5FZ4Q.fastq.tgzCSM5FZ4Q.log
HSM5FZBQ.fastq.tgzHSM5FZBQ.log
ESM5MEBA.fastq.tgzESM5MEBA.log
MSM5LLEN.fastq.tgzMSM5LLEN.log
MSM5ZOJY.fastq.tgzMSM5ZOJY.log
MSM5LLGX.fastq.tgzMSM5LLGX.log
MSM5LLII.fastq.tgzMSM5LLII.log
ESM5GEYU.fastq.tgzESM5GEYU.log
MSM5LLE5.fastq.tgzMSM5LLE5.log
MSM5LLIG.fastq.tgzMSM5LLIG.log
MSM5LLHR.fastq.tgzMSM5LLHR.log
HSM5MD4C.fastq.tgzHSM5MD4C.log
CSM5MCUC.fastq.tgzCSM5MCUC.log
MSM5FZ8Y.fastq.tgzMSM5FZ8Y.log
MSM5LLH2.fastq.tgzMSM5LLH2.log
MSM5LLGH.fastq.tgzMSM5LLGH.log
CSM5FZ4K.fastq.tgzCSM5FZ4K.log
HSM5FZC2.fastq.tgzHSM5FZC2.log
MSM5FZ9T.fastq.tgzMSM5FZ9T.log
ESM5MEEA.fastq.tgzESM5MEEA.log
HSM5MD8F.fastq.tgzHSM5MD8F.log
MSM5LLE7.fastq.tgzMSM5LLE7.log
HSM5MD51.fastq.tgzHSM5MD51.log
CSM5FZ4A.fastq.tgzCSM5FZ4A.log
MSM5LLIS.fastq.tgzMSM5LLIS.log
HSM5MD4P.fastq.tgzHSM5MD4P.log
ESM5MEA9.fastq.tgzESM5MEA9.log
CSM5MCV1.fastq.tgzCSM5MCV1.log
CSM5MCUW.fastq.tgzCSM5MCUW.log
MSM5FZ9N.fastq.tgzMSM5FZ9N.log
CSM5FZ46.fastq.tgzCSM5FZ46.log
HSM5MD87.fastq.tgzHSM5MD87.log
CSM5MCV3.fastq.tgzCSM5MCV3.log
HSM5MD4S.fastq.tgzHSM5MD4S.log
CSM5FZ4I.fastq.tgzCSM5FZ4I.log
MSM5LLEX.fastq.tgzMSM5LLEX.log
CSM5FZ4O.fastq.tgzCSM5FZ4O.log
MSM5LLI2.fastq.tgzMSM5LLI2.log
CSM5MCWK.fastq.tgzCSM5MCWK.log
ESM5MEEG.fastq.tgzESM5MEEG.log
ESM5GEZ4.fastq.tgzESM5GEZ4.log
CSM5MCUQ.fastq.tgzCSM5MCUQ.log
ESM5MEBP.fastq.tgzESM5MEBP.log
MSM5LLI6.fastq.tgzMSM5LLI6.log
HSM5MD57.fastq.tgzHSM5MD57.log
MSM5LLFS.fastq.tgzMSM5LLFS.log
ESM5MEEJ.fastq.tgzESM5MEEJ.log
MSM5LLGV.fastq.tgzMSM5LLGV.log
ESM5MEEC.fastq.tgzESM5MEEC.log

We are grateful for IBDMDB funding from the NIH Human Microbiome Project NIDDK U54DE023798.